Mule Deer Migration Corridors - Upper San Joaquin River Watershed - 2013-2016 [ds2878]

SDE Feature Class

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Tags
mule deer, Odocoileus hemionus, GPS, Brownian bridge movement model, migration mapper, stopover, winter range, telemetry, connectivity, California, Sierra Nevada, San Joaquin


Summary

Migration corridor, stopover, and winter range locations for mule deer (Odocoileus hemionus) developed by the California Department of Fish and Wildlife (CDFW) for the upper San Joaquin watershed herd. Corridors, stopovers, and winter ranges were developed in Migration Mapper with Brownian Bridge Movement Models using GPS locations from collared deer. Migration corridors represent movement routes used by deer between winter and summer range habitats. Moderate use corridors were used by 10% of the animals sampled, and high use corridors were used by 20% of the animals sampled. Migration stopovers and winter range polygons also represent high use areas.

Description

The raw dataset consisted of GPS way points collected from Advanced Telemetry Solutions (ATS) Iridium LITE/GPS model G2110L collars with SureDrop collar break off mechanisms, or Tellus small iridium collars equipped with Tellus RL-Drop off on mule deer in the upper San Joaquin River watershed. Migratory deer within the San Joaquin Watershed occupy most of the watershed above Kerckhoff Reservoir, Fresno and Madera Counties, California. The data was collected from 2013-2016 by Tim Kroeker. Fix rates varied between 2 and 12 hours. Human infrastructure in the watershed is widespread and includes residential, water control, hydroelectric power, and recreational use developments. Steep topography between winter and summer range limit crossing points along the San Joaquin River. Habitat conditions favoring deer declined from a peak around 1950, resulting in a reduction in the deer population. The current deer population is believed to be about 4,000. A massive wildfire burned through most of the watershed in 2020, dramatically changing habitat conditions in some areas. To improve the quality of the data set as per Bjrneraas et al. (2010), the GPS data were filtered prior to analysis to remove locations which were: i) further from either the previous point or subsequent point than an individual deer is able to travel in the elapsed time, ii) forming spikes in the movement trajectory based on outgoing and incoming speeds and turning angles sharper than a predefined threshold , or Iii) fixed in 2D space and visually assessed as a bad fix by the analyst.

The methodology used for this migration analysis allowed for the mapping of winter ranges and the identification and prioritization of migration corridors in a single deer population. Brownian Bridge Movement Models (BBMMs; Sawyer et al. 2009) were constructed with GPS collar data from 30 deer, including location, date, time, and average location error as inputs in Migration Mapper. Corridors and stopovers were prioritized based on the number of animals moving through a particular area. BBMMs were produced at a spatial resolution of 30 m with a fixed motion variance parameter of 1000 using a sequential fix interval of less than 27 hours. Winter range analyses were based on data from 32 individual deer. A separate BBMM was created for all deer locations designated as winter range using a fixed motion variance parameter of 1000. Winter range designations for this herd would likely expand with a larger sample, filling in some of the gaps between winter range polygons in the map. Large water bodies were clipped from the final outputs.

Corridors are visualized based on deer use per cell in the BBMMs, with greater than 1 deer, greater than or equal to 3 deer (10% of the sample), and greater than or equal to 6 deer (20% of the sample) representing migration corridors, moderate use, and high use corridors, respectively. Stopovers were calculated as the top 10 percent of the population level utilization distribution during migrations and can be interpreted as high use areas. Stopover polygon areas less than 20,000 m 2 were removed, but remaining small stopovers may be interpreted as short-term resting sites, likely based on a small concentration of points from an individual animal. Winter range is visualized as the 50 th percentile contour of the winter range utilization distribution.

Credits

Migration Mapper: https://migrationinitiative.org/content/migration-mapper Bjrneraas, K., Van Moorter, B., Rolandsen, C. M., and Herfindal, I. (2010). Screening global positioning system location data for errors using animal movement characteristics. The Journal of Wildlife Management, 74(6), 1361-1366. Sawyer, H., Kauffman, M. J., Nielson, R. M., and Horne, J. S. (2009). Identifying and prioritizing ungulate migration routes for landscapelevel conservation. Ecological Applications, 19(8), 2016-2025. California Department of Fish and Wildlife (CDFW)

Use limitations

The user accepts sole responsibility for the correct interpretation of this report and the correct use of its accompanying dataset. Prior to using this dataset, please contact Tim Kroeker or Julie Garcia to ensure correct interpretation of the data and for sharing permissions. This dataset should not be shared with anyone outside of CDFW without permission. Given the sample size used to construct winter range utilization distributions ( n =32), winter range for mule deer in the upper San Juaquin watershed likely extends beyond the borders of what is considered winter range in our analysis, and may not represent the true extent of the winter range for this population. Moreover, our sample only represents a small fraction of the true population of mule deer migrating in this area; therefore, certain corridors may have gone undetected in our analysis.

License: This work is licensed under Creative Commons Attribution 4.0 International License ( https://creativecommons.org/licenses/by/4.0/ ). Using the citation standards recommended for BIOS datasets ( https://www.wildlife.ca.gov/Data/BIOS/Citing-BIOS ) satisfies the attribution requirements of this license.

Disclaimer: The State makes no claims, promises, or guarantees about the accuracy, completeness, reliability, or adequacy of these data and expressly disclaims liability for errors and omissions in these data. No warranty of any kind, implied, expressed, or statutory, including but not limited to the warranties of non-infringement of third party rights, title, merchantability, fitness for a particular purpose, and freedom from computer virus, is given with respect to these data.

Extent

West -119.567659 East -118.985601
North 37.510602 South 37.063315

Scale Range
Maximum (zoomed in) 1:5,000
Minimum (zoomed out) 1:150,000,000

ArcGIS Metadata

Topics and Keywords

Themes or categories of the resource biota, environment, boundaries


* Content type Downloadable Data
Export to FGDC CSDGM XML format as Resource Description No

Place keywords California, Sierra Nevada, San Joaquin

Theme keywords mule deer, Odocoileus hemionus, GPS, Brownian bridge movement model, migration mapper, stopover, winter range, telemetry, connectivity

Citation

Title Mule Deer Migration Corridors - Upper San Joaquin River Watershed - 2013-2016 [ds2878]
Publication date 2020-07-0800:00:00


Presentation formats * digital map


Citation Contacts

Responsible party
Organization's name California Department of Fish and Wildlife
Contact's role originator


Responsible party
Individual's name Tim Kroeker
Organization's name California Department of Fish and Wildlife Central Region
Contact's position Environmental Scientist
Contact's role point of contact


Contact information
Phone
Voice 559-641-7592

Address
Type
e-mail address Tim.Kroeker@wildlife.ca.gov



Responsible party
Individual's name Julie Garcia
Organization's name California Department of Fish & Wildlife
Contact's position Ungulate Biologist, Wildlife
Contact's role point of contact


Contact information
Phone
Voice +1 (916) 371-0227

Address
Type
e-mail address Julie.Garcia@wildlife.ca.gov



Resource Details

Dataset languages * English(UNITED STATES)
Dataset character set utf8 - 8 bit UCS Transfer Format


Status completed
Spatial representation type * vector


* Processing environment Version 6.2 (Build 9200) ; Esri ArcGIS 10.5.1.7333


Credits
Migration Mapper: https://migrationinitiative.org/content/migration-mapper Bjrneraas, K., Van Moorter, B., Rolandsen, C. M., and Herfindal, I. (2010). Screening global positioning system location data for errors using animal movement characteristics. The Journal of Wildlife Management, 74(6), 1361-1366. Sawyer, H., Kauffman, M. J., Nielson, R. M., and Horne, J. S. (2009). Identifying and prioritizing ungulate migration routes for landscapelevel conservation. Ecological Applications, 19(8), 2016-2025. California Department of Fish and Wildlife (CDFW)
ArcGIS item properties
* Name Mule Deer Migration Corridors - Upper San Joaquin River Watershed - 2013-2016 [ds2878]
* Size 0.000
* Location Server=; :; Database=; User=; Version=
* Access protocol ArcSDE Connection

Extents

Extent
Vertical extent
* Minimum value 0.000000
* Maximum value 0.000000


Extent
Geographic extent
Bounding rectangle
Extent type Extent used for searching
* West longitude -119.567659
* East longitude -118.985601
* North latitude 37.510602
* South latitude 37.063315
* Extent contains the resource Yes

Extent in the item's coordinate system
* West longitude 38388.365100
* East longitude 89545.314900
* South latitude -105468.376600
* North latitude -56135.820700
* Extent contains the resource Yes

Resource Points of Contact

Point of contact
Individual's name Tim Kroeker
Organization's name California Department of Fish and Wildlife Central Region
Contact's position Environmental Scientist
Contact's role point of contact


Contact information
Phone
Voice 559-641-7592

Address
Type
e-mail address Tim.Kroeker@wildlife.ca.gov



Point of contact
Individual's name Julie Garcia
Organization's name California Department of Fish & Wildlife
Contact's position Ungulate Biologist, Wildlife
Contact's role point of contact


Contact information
Phone
Voice +1 (916) 371-0227

Address
Type
e-mail address Julie.Garcia@wildlife.ca.gov



Resource Maintenance

Resource maintenance
Update frequency not planned


Resource Constraints

Constraints
Limitations of use

The user accepts sole responsibility for the correct interpretation of this report and the correct use of its accompanying dataset. Prior to using this dataset, please contact Tim Kroeker or Julie Garcia to ensure correct interpretation of the data and for sharing permissions. This dataset should not be shared with anyone outside of CDFW without permission. Given the sample size used to construct winter range utilization distributions ( n =32), winter range for mule deer in the upper San Juaquin watershed likely extends beyond the borders of what is considered winter range in our analysis, and may not represent the true extent of the winter range for this population. Moreover, our sample only represents a small fraction of the true population of mule deer migrating in this area; therefore, certain corridors may have gone undetected in our analysis.

License: This work is licensed under Creative Commons Attribution 4.0 International License ( https://creativecommons.org/licenses/by/4.0/ ). Using the citation standards recommended for BIOS datasets ( https://www.wildlife.ca.gov/Data/BIOS/Citing-BIOS ) satisfies the attribution requirements of this license.

Disclaimer: The State makes no claims, promises, or guarantees about the accuracy, completeness, reliability, or adequacy of these data and expressly disclaims liability for errors and omissions in these data. No warranty of any kind, implied, expressed, or statutory, including but not limited to the warranties of non-infringement of third party rights, title, merchantability, fitness for a particular purpose, and freedom from computer virus, is given with respect to these data.


Spatial Reference

ArcGIS coordinate system
* Type Projected
* Geographic coordinate reference GCS_WGS_1984
* Projection WGS_1984_Web_Mercator_Auxiliary_Sphere
* Coordinate reference details
Projected coordinate system
Well-known identifier 102100
X origin -20037700
Y origin -30241100
XY scale 10000
Z origin 0
Z scale 1
M origin 0
M scale 1
XY tolerance 0.001
Z tolerance 0.001
M tolerance 0.001
High precision true
Latest well-known identifier 3857
Well-known text PROJCS["WGS_1984_Web_Mercator_Auxiliary_Sphere",GEOGCS["GCS_WGS_1984",DATUM["D_WGS_1984",SPHEROID["WGS_1984",6378137.0,298.257223563]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Mercator_Auxiliary_Sphere"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",0.0],PARAMETER["Standard_Parallel_1",0.0],PARAMETER["Auxiliary_Sphere_Type",0.0],UNIT["Meter",1.0],AUTHORITY["EPSG",3857]]

Reference system identifier
* Value 3857
* Codespace EPSG
* Version 8.8(9.3.1.2)


Spatial Data Properties

Vector
* Level of topology for this dataset geometry only


Geometric objects
Feature class name DS2878_20221207
* Object type composite
* Object count 0



ArcGIS Feature Class Properties
Feature class name DS2878_20221207
* Feature type Simple
* Geometry type Polygon
* Has topology FALSE
* Feature count 0
* Spatial index TRUE
* Linear referencing FALSE



Geoprocessing history

Process
Date 2022-12-0715:53:06
Tool location c:\program files (x86)\arcgis\desktop10.5\ArcToolbox\Toolboxes\Data Management Tools.tbx\Project
Command issued
Include in lineage when exporting metadata No


Process
Date 2022-12-0716:00:27
Tool location c:\program files (x86)\arcgis\desktop10.5\ArcToolbox\Toolboxes\Conversion Tools.tbx\FeatureClassToFeatureClass
Command issued
Include in lineage when exporting metadata No


Distribution

Distribution format
* Name SDE Feature Class


Transfer options
* Transfer size 0.000


Online source
Location https://www.wildlife.ca.gov/Data/BIOS
Function performed information

Online source
Location http://ftp.dfg.ca.gov/Public/BDB/GIS/BIOS/Public_Datasets/2800_2899/ds2878.zip
Function performed download

Fields

Details for object DS2878_20221207
* Type Feature Class
* Row count 0


Field OBJECTID
* Alias OBJECTID
* Data type OID
* Width 4
* Precision 10
* Scale 0
* Field description
Internal feature number.
* Description source
Esri
* Description of values
Sequential unique whole numbers that are automatically generated.




Field Shape
* Alias Shape
* Data type Geometry
* Width 4
* Precision 0
* Scale 0
* Field description
Feature geometry.
* Description source
Esri
* Description of values
Coordinates defining the features.




Field Details
* Alias Details
* Data type String
* Width 100
* Precision 0
* Scale 0
Field description
Description of each polygon output from analysis.


Field UD_Percent
* Alias UD_Percent
* Data type Integer
* Width 4
* Precision 10
* Scale 0
Field description
Utilization distribution percentage used as threshold to determine migration stopovers and winter range analysis.


Field Shape.STArea()
* Alias Shape.STArea()
* Data type Double
* Width 0
* Precision 0
* Scale 0




Field Shape.STLength()
* Alias Shape.STLength()
* Data type Double
* Width 0
* Precision 0
* Scale 0






Metadata Details

* Metadata language English(UNITED STATES)
* Metadata character set utf8 - 8 bit UCS Transfer Format


Scope of the data described by the metadata * dataset
Scope name * dataset


* Last update 2022-12-07


ArcGIS metadata properties
Metadata format ArcGIS1.0
Standard or profile used to edit metadata FGDC
Metadata style FGDC CSDGM Metadata


Created in ArcGIS for the item 2022-12-0715:53:03
Last modified in ArcGIS for the item 2022-12-0716:00:25


Automatic updates
Have been performed Yes
Last update 2022-12-0716:00:25


Metadata Contacts

Metadata contact
Individual's name Tim Kroeker
Organization's name California Department of Fish and Wildlife Central Region
Contact's position Environmental Scientist
Contact's role point of contact


Contact information
Phone
Voice 559-641-7592

Address
Type
e-mail address Tim.Kroeker@wildlife.ca.gov



Metadata contact
Individual's name Julie Garcia
Organization's name California Department of Fish & Wildlife
Contact's position Ungulate Biologist, Wildlife
Contact's role point of contact


Contact information
Phone
Voice +1 (916) 371-0227

Address
Type
e-mail address Julie.Garcia@wildlife.ca.gov



Metadata Maintenance

Maintenance
Update frequency not planned


Thumbnail and Enclosures